Atr-MIR156c

Basic info.

• miRNA locus ID
• Atr-MIR156c

• miRNA locus accession
• PmiREN000191

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00065  3401555  3401676  -

• Comments
• A member of family MIR156

• Confidence level
• 

Secondary strurture and sequence

  AAGGGGGTAGTGGGTTAT       -      -         A     C  ATT     AC
                    GCTGACA GAAGAG AGTGAGCAC CATGG CA   GTATA  
                    ||||||| |||||| ||||||||| ||||| ||   |||||   
                    CGACTGT CTTCTC TCACTCGTG GTGTC GT   CGTAT  
GTTATCGCCCTTTACTATTT       T      C         C     T  CGC     GC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]