Atr-MIR157a

Basic info.

• miRNA locus ID
• Atr-MIR157a

• miRNA locus accession
• PmiREN000192

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00044  4041321  4041446  +

• Comments
• A member of family MIR157

• Confidence level
• 

Secondary strurture and sequence

AGAGA  -   TC     -----T  T         -A             --      C      TGG
     GG GGG  TGGTG      TG TGACAGAAG  TAGAGAGCACATA  AAGTAA GTGCAG   
     || |||  |||||      || |||||||||  |||||||||||||  |||||| ||||||   G
     CC CCC  ACCAC      AC ACTGTCTTC  ATCTCTCGTGTAT  TTTATT TACGTT   
    C  A   TT     TCGTCC  T         CG             GT      T      TGC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]