Atr-MIR157b

Basic info.

• miRNA locus ID
• Atr-MIR157b

• miRNA locus accession
• PmiREN000193

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00061  4133450  4133577  +

• Comments
• A member of family MIR157

• Confidence level
• 

Secondary strurture and sequence

CTTGAAA       --------T   -  T  A      -            AAA  AA  C     ATAGG
       GTAGAGT         GGT TG TG CAGAAG ATAGAGAGCACA   CC  CA AAGCA     
       |||||||         ||| || || |||||| ||||||||||||   ||  || |||||     C
       TATCTCA         CCG AC AC GTCTTC TATCTCTCGTGT   GG  GT TTCGT     
              CGAAGATTC   T  C  C      A            ATA  AG  C     ACTTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]