Atr-MIR160a

Basic info.

• miRNA locus ID
• Atr-MIR160a

• miRNA locus accession
• PmiREN000195

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00092  1776639  1776763  -

• Comments
• A member of family MIR160

• Confidence level
• 

Secondary strurture and sequence

GGAAAAGGTAAA     -------T     C       C              TA   T  A   TGAG
            TGGGG        TATGC TGGCTCC TGTATGCCACTCTT  GAG CC ATC    
            |||||        ||||| ||||||| ||||||||||||||  ||| || |||     
            ATCTC        ATACG ACCGAGG GCGTGCGGTGGGAG  CTC GG TAG    
     GCTAACG     TCTCTTTC     A       A              TA   -  C   TCGG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]