Atr-MIR164a

Basic info.

• miRNA locus ID
• Atr-MIR164a

• miRNA locus accession
• PmiREN000197

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00007  3789215  3789369  +

• Comments
• A member of family MIR164

• Confidence level
• 

Secondary strurture and sequence

  GGGTTTGGGTGCTT  TC          CA         C        T       --C  TTGAAGATGAAGAAAA
                GC  GATGGAGAAG  GGGCACGTG ATTACAAA CCATCTT   CT                
                ||  ||||||||||  ||||||||| |||||||| |||||||   ||                A
                CG  CTACCTCTTC  TCCGTGTAC TGGTGTTT GGTGGGA   TA                
ACTCCAAGTTACTCCT  TA          TA         T        T       ATG  AAGTGATGAAAAGAAG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]