Atr-MIR169a

Basic info.

• miRNA locus ID
• Atr-MIR169a

• miRNA locus accession
• PmiREN000210

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00016  2808592  2808737  -

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

  AAGAGACAGTGTTATTTTGA          T    T     ----    CACAATGTGGATGGTTCTAGGGTGCT
                      TAGCCAAGGA GACT GCCTA    CATC                          
                      |||||||||| |||| |||||    ||||                           
                      ATCGGTTCCT CTGG CGGAT    GGAG                          
ATCTTCTGTCCCAGTCAGTCCA          -    -     CTTT    TATTACTCCCAGAATTAACCCCGGTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]