Atr-MIR169b

Basic info.

• miRNA locus ID
• Atr-MIR169b

• miRNA locus accession
• PmiREN000211

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00057  2389300  2389431  -

• Comments
• A member of family MIR169

• Confidence level
• 

Secondary strurture and sequence

  GAGGGGTGCAATGTGC    G         A        - TTT  T   AA  T   A     TGAA
                  TAGG TAGCCAAGG TGACTTGC C   GA CAC  TG GTG GAGAG    
                  |||| ||||||||| |||||||| |   || |||  || ||| |||||     
                  ATCC ATCGGTTCC GCTGAACG G   TT GTG  AC CAC CTCTT    
GTACTCTCCGTTCTAGGA    A         -        A TAT  C   --  -   -     GGTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]