Atr-MIR170

Basic info.

• miRNA locus ID
• Atr-MIR170

• miRNA locus accession
• PmiREN000213

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00037  3460017  3460137  -

• Comments
• A member of family MIR170

• Confidence level
• 

Secondary strurture and sequence

  GAGGTGTAAAATTAAC                C          -A A        AAG  A
                  AGGAGGTATTGATGCG CTCAATTCGA  G CATGGTTA   GC 
                  |||||||||||||||| ||||||||||  | ||||||||   || G
                  TCCTCTATAACTGCGC GAGTTAGGCT  C GTACCGAT   CG 
CTCAACAACAAGCCATCT                C          AG -        --G  T

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]