Atr-MIR171a

Basic info.

• miRNA locus ID
• Atr-MIR171a

• miRNA locus accession
• PmiREN000214

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00001  2643237  2643352  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  ATTGAAGGAGTTAT   C        A -             AA    T      AAA
                TTG GATGTTGG C CGGTTCAATCAGA  ACAC GCCCAG   
                ||| |||||||| | |||||||||||||  |||| ||||||    
                GAC CTATAACC G GCCGAGTTAGTTT  TGTG TGGGTC   
CTGTTCTACTCTTCGA   C        - C             CG    C      GTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]