Atr-MIR2111

Basic info.

• miRNA locus ID
• Atr-MIR2111

• miRNA locus accession
• PmiREN000221

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00165  819323  819463  +

• Comments
• A member of family MIR2111

• Confidence level
• 

Secondary strurture and sequence

  CTAACTGGCATGAGAGTGGA                      GTTTAGCCCAC     T     -  TATC
                      TAATCTGTATCTTGAGGTTTGG           AACTA ACTTC AT    
                      ||||||||||||||||||||||           ||||| ||||| ||     
                      ATTGGACATAGGACTCCAGACC           TTGAT TGAGG TG    
TTTGACTGGTAACATCTCCTCC                      --AAAACCCAA     C     C  TGAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]