Atr-MIR319e

Basic info.

• miRNA locus ID
• Atr-MIR319e

• miRNA locus accession
• PmiREN000227

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00053  805747  805954  +

• Comments
• A member of family MIR319

• Confidence level
• 

Secondary strurture and sequence

     -TCCA   TG -C                     CTC    T     T        GG   G  G    C        T   A    C   -GAA   GTC
GAAGT     GGT  G  AAGGGAGCTCTCTTCAGTCCA   ATGG TGGCA GAGGGTTG  TTG CT CCGT TCATTCAT CAA TGCT AGT    TTT   
|||||     |||  |  |||||||||||||||||||||   |||| ||||| ||||||||  ||| || |||| |||||||| ||| |||| |||    |||    
CTTCG     TTA  C  TTCCCTCGAGGGAAGTCAGGT   TATC ACCGT TTCTTAGC  GAC GA GGCG AGTAAGTG GTT ATGA TCA    AAA   
     TATTA   GT TC                     TCT    T     -        TA   A  G    T        T   A    C   ATCG   GAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]