Atr-MIR396d

Basic info.

• miRNA locus ID
• Atr-MIR396d

• miRNA locus accession
• PmiREN000241

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00090  1850429  1850538  -

• Comments
• A member of family MIR396

• Confidence level
• 

Secondary strurture and sequence

  CAACTGATGGCTTCATGCTTC   A            A   A  TT  ATA   TG
                       TCC CGGCTTTCTTGA CTT GT  GA   AGG  
                       ||| |||||||||||| ||| ||  ||   |||   
                       AGG GTCGAAAGAACT GAA CA  CT   TCC  
TTAAAACTCACCTAGATACAAAA   C            A   -  TT  ---   GA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]