Atr-MIR396n

Basic info.

• miRNA locus ID
• Atr-MIR396n

• miRNA locus accession
• PmiREN000250

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00021  4942932  4943057  +

• Comments
• A member of family MIR396

• Confidence level
• 

Secondary strurture and sequence

    AA   TT    G       C       -           T  T  C   -  ATTG     AT
      TGA  GTCT CATGTTT TCCACAG CTTTCTTGAAC TG TA TCA AC    CCTCT  
      |||  |||| ||||||| ||||||| ||||||||||| || || ||| ||    |||||   
      ACT  CAGA GTACGAA AGGTGTC GAAAGAACTTG AC AT AGT TG    GGAGA  
TTCTAA   -C    A       -       C           T  C  A   C  CCCG     AG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]