Atr-MIR477a

Basic info.

• miRNA locus ID
• Atr-MIR477a

• miRNA locus accession
• PmiREN000260

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00003  709706  709814  +

• Comments
• A member of family MIR477

• Confidence level
• 

Secondary strurture and sequence

  TT            A C            CA          G     --    TT
    TCAGGGCACCTA T TTCACTCTCCCT  AGGGCTTCTG TCCTT  ACCA  
    |||||||||||| | ||||||||||||  |||||||||| |||||  ||||   
    GGTTTTGTGGAT G AGGTGAGAGGGG  TTCCGGAGAT AGGAG  TGGT  
CTTT            C T            -A          A     AA    AC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]