Atr-MIR477c

Basic info.

• miRNA locus ID
• Atr-MIR477c

• miRNA locus accession
• PmiREN000262

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00003  787275  787385  +

• Comments
• A member of family MIR477

• Confidence level
• 

Secondary strurture and sequence

  TTTCAGG         CTT         T          TCG     TA   TT
         GCACCTAAT   CACTCTCCC CAATGGCTTC   TCCTT  CCT  
         |||||||||   ||||||||| ||||||||||   |||||  |||  C
         TGTGGATTA   GTGGGAGGG GTTGCCGGAG   AGGAG  GGG  
CTTCCGTTT         TAC         T          CTA     GA   TA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]