Atr-MIR477d

Basic info.

• miRNA locus ID
• Atr-MIR477d

• miRNA locus accession
• PmiREN000263

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00003  739439  739547  -

• Comments
• A member of family MIR477

• Confidence level
• 

Secondary strurture and sequence

TTTC    ----      ATCC          T            ---A     AC TT
    AGGT    CACCTA    TCACTCTCCC CAAGGGCTTCTA    TCCTC  C  
    ||||    ||||||    |||||||||| ||||||||||||    |||||  |  T
    TCCG    GTGGAT    AGTGGGAGGG GTTTCCGAAGAT    AGGGG  G  
  CT    TTTT      CGTA          -            ATGA     GA AG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]