Atr-MIR8551

Basic info.

• miRNA locus ID
• Atr-MIR8551

• miRNA locus accession
• PmiREN000266

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00002  4164907  4165120  +

• Comments
• A member of family MIR8551

• Confidence level
• 

Secondary strurture and sequence

     ATA  --T  -    GA  --        C  -            AA    TTCTAGAACACTTTTGAAATTTCCGGAACAACTTTTATGACTTGGAAACTGTTAACGA
GTTTA   GG   CA AAAT  GT  CCAAGAGC GA CCTAGAACATCC  AAAG                                                          
|||||   ||   || ||||  ||  |||||||| || ||||||||||||  ||||                                                           
CCCAA   AT   CC GTTT  TG  TAGGTTCT CG TTGGATCTTGTA  GGGT                                                          
     ---  CGC  C    --  TG        -  A            --    AATTAAAGACCTTTCGGGGTTTTGTAAGGTTTTAAAAGACTTTTTAAAATACTGTCAC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]