Atr-MIR8562b

Basic info.

• miRNA locus ID
• Atr-MIR8562b

• miRNA locus accession
• PmiREN000271

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00221  34593  34836  +

• Comments
• A member of family MIR8562

• Confidence level
• 

Secondary strurture and sequence

        T  -           A  -                  C  -    T  - AAAAAAT  -------  -    C            AAAA      AGACTAAAATTCCTCTGAAAATTTGTGAGAGT
TTTTATTT TT TTCTATAAATC GA ATGATCTGAAATTTGGAG GT GTGT CA T       AG       GA TAAT TAATAAAAATAT    ATAAAT                                
|||||||| || ||||||||||| || |||||||||||||||||| || |||| || |       ||       || |||| ||||||||||||    ||||||                                 
TAAAAATA AA AAAAGATATTT AG CTTACTAGACTTTAAACC TC CGCA CA G       TA       TC CTGT TAATTATTTTTA    TACTTT                                
        -  C           -  C                  -  A    -  T -------  GAATCAC  T    -            ----      TTTTTTTAAAGTTTTATATTTAACTGGTTTTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]