Atr-MIR8565a

Basic info.

• miRNA locus ID
• Atr-MIR8565a

• miRNA locus accession
• PmiREN000273

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00025  1560429  1560540  -

• Comments
• A member of family MIR8565

• Confidence level
• 

Secondary strurture and sequence

        T  -                     C  -             ----   TGG
CTCAAAGG TC ACCATTAAATTTGGCACAGAT TC TAGAAAAGTTATC    ACA   
|||||||| || ||||||||||||||||||||| || |||||||||||||    |||    
TGGGGTTT CC AGTGGTGATTTAAACCGTGTC TA AGATCTTTTCAGT    GGT   
        -  T                     -  T             TCAG   GTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]