Atr-MIR8565c

Basic info.

• miRNA locus ID
• Atr-MIR8565c

• miRNA locus accession
• PmiREN000275

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00080  3094279  3094390  +

• Comments
• A member of family MIR8565

• Confidence level
• 

Secondary strurture and sequence

          C  ATT  ---                              ----   TGG
TCCAAAGGAT AC   TA   AATTTGGCACAGATCTCTAGAAAAGTTATC    ATA   
|||||||||| ||   ||   ||||||||||||||||||||||||||||||    |||    
TGGGGTTTTC TA   TG   ATTTAAACCGTGTCTAGAGATCTTTTCAGT    GGT   
          -  --A  GTT                              TCAA   GTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]