Atr-MIR8578

Basic info.

• miRNA locus ID
• Atr-MIR8578

• miRNA locus accession
• PmiREN000288

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00036  3264755  3264878  +

• Comments
• A member of family MIR8578

• Confidence level
• 

Secondary strurture and sequence

GAAAGA    G ---AAAA      T         C                 A GG    ATT
      TGCT T       AATCTT ATGAGTGAT TTTGCAATAGTTTCCTT T  AAAT   
      |||| |       |||||| ||||||||| ||||||||||||||||| |  ||||    
      ATGA A       TTAGAA TACTCACTG AAGCGTTATCAGAGGAA G  TTTG   
 GTTGG    G GTAATAA      T         T                 G TT    GTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]