Atr-MIR8612

Basic info.

• miRNA locus ID
• Atr-MIR8612

• miRNA locus accession
• PmiREN000302

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold03445  287  502  -

• Comments
• A member of family MIR8612

• Confidence level
• 

Secondary strurture and sequence

         C  A  -  T  -     A  -                  ----  A  -                       A  T  ------         CTTTTCCATCC      ATA
AAAATACTA CA AT AA TG TGACC CG CGATGAAATTTGGACATG    AG GT AGACAAAATTACTATTCATTTTT CC CG      TTGGGAAGA           ATATAT   
||||||||| || || || || ||||| || ||||||||||||||||||    || || ||||||||||||||||||||||| || ||      |||||||||           ||||||    
TATTTTGTG AT GT TG TT GCACT GG GTGCTACTTTAAACCTGT    AC TC CATCTGTTTTAGTGATAAGTAAA AA GG      GCAATTCTT           CTTATA   
         -  T  C  -  T     -  C                  CATT  -  C                       -  C  TTATTC         -----------      TAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]