Atr-MIR8615

Basic info.

• miRNA locus ID
• Atr-MIR8615

• miRNA locus accession
• PmiREN000304

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00069  1966183  1966343  -

• Comments
• A member of family MIR8615

• Confidence level
• 

Secondary strurture and sequence

  TAC                    A               A A  -----AA     TG      ATTAGCG  G  G  CAAT
     AACGAATGGCGTTTGTGCGT GAATCATACCTGCAA G CA       ACCTC  GGAGGT       CC TG GA    
     |||||||||||||||||||| ||||||||||||||| | ||       |||||  ||||||       || || ||     
     TTGCTTACCGCAAGCACGCA CTTAGTATGGATGTT C GT       TGGAG  TCTCCA       GG AC TT    
CAGTT                    C               C A  ACAAAGA     GT      --GAACA  A  G  TCCA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]