Atr-MIRN22

Basic info.

• miRNA locus ID
• Atr-MIRN22

• miRNA locus accession
• PmiREN000307

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00014  5920633  5920878  +

• Comments
• A member of family MIRN22

• Confidence level
• 

Secondary strurture and sequence

 AAGTTTTT    -TTT AA        T           A   C      AT   T      A    C TT       TTTACGCAAGA    A  ATTGGTTTGATGATGAAGAGAAGGAAATTAA
         GTGA    G  TATTTTGC CAAGATCGCGC GTT GGTCAT  ACA TGCATC AGGT C  GTCTATC           CATT CC                               
         ||||    |  |||||||| ||||||||||| ||| ||||||  ||| |||||| |||| |  |||||||           |||| ||                                
         TACT    C  ATAAGACG GTTCTAGTGCG CAA TTGGTA  TGT GCGTAG TCCA G  CAGATAG           AGAA GA                               
TAACTCCAT    TCTT GC        T           -   A      CT   C      C    T TT       ------TAAAA    -  AGAAGTAGTCTTTTGGTAAGAGGGACAAGGG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]