Atr-MIRN24

Basic info.

• miRNA locus ID
• Atr-MIRN24

• miRNA locus accession
• PmiREN000309

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00028  3373375  3373545  +

• Comments
• A member of family MIRN24

• Confidence level
• 

Secondary strurture and sequence

  GGACATTGACAAATTGCCACA   A  A           C   AAGTGTAAATGTC   T    TCATGCTACCGTTTCACCCTTCATAG
                       CTG CA ATTGCCACATG CCA             GAC GTGG                          
                       ||| || ||||||||||| |||             ||| ||||                          A
                       GAC GT TGACGGTGTAC GGT             GGG AGGT                          
ATAATAACAATTTCTCTACCATA   A  C           C   ------------A   T    TCGCTATTCAAGCCTCTCATGCTAGG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]