Atr-MIRN28

Basic info.

• miRNA locus ID
• Atr-MIRN28

• miRNA locus accession
• PmiREN000315

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00041  1932066  1932189  -

• Comments
• A member of family MIRN28

• Confidence level
• 

Secondary strurture and sequence

  TCT    -GT    G     AC           C       -G    CT       ---   AA
     TGAA   GGGG ACAAG  GTGATGTTGGT CGGTTCA  TAAG  TCTCTCA   TTC  
     ||||   |||| |||||  ||||||||||| |||||||  ||||  |||||||   |||  C
     ACTT   TCCC TGTTT  CACTATAACTA GCCGAGT  ATTT  AGAGAGT   AAG  
TCGGT    ACT    G     -C           A       AG    -T       TCG   TA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]