Atr-MIRN31

Basic info.

• miRNA locus ID
• Atr-MIRN31

• miRNA locus accession
• PmiREN000322

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00012  7497776  7498041  +

• Comments
• A member of family MIRN31

• Confidence level
• 

Secondary strurture and sequence

                                          -AA  A     T    TA  A   A    --TTATT    CGCT   AAT               ACT     GTGAAAAAATATTGACCAAAATACC
                      ATTTTTTTACAAATTGGAAT   CT GAAAT TGGA  GT TGT CATC       GAGG    TCT   AAAAATATAAAAAAA   TTTTT                         
                      ||||||||||||||||||||   || ||||| ||||  || ||| ||||       ||||    |||   |||||||||||||||   |||||                         C
                      TAAAAAGATGTTTAGCCTTA   GA CTTTA ACCT  CA ATA GTAG       CTCT    AGA   TTTTTATATTTTTTT   TAACT                         
GTGCTAACAAATTATCACAAAA                    CAG  -     C    CA  G   A    TTTTTAT    --TT   AAC               ---     GGTTTTATGGGGACTTTACAAAGCC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]