Atr-MIRN34

Basic info.

• miRNA locus ID
• Atr-MIRN34

• miRNA locus accession
• PmiREN000325

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00034  4907572  4907750  -

• Comments
• A member of family MIRN34

• Confidence level
• 

Secondary strurture and sequence

AGGATGG      -- CTTG ----  A       - - TCGCACCCCTTTTTATTGCGACTGCCAATTCTCTTTGTGCTCGGTAAACCGATTTTGAT
       GTGACC  T    G    GA GTCCTTG T G                                                           
       ||||||  |    |    || ||||||| | |                                                            
       TTGAAA  T    G    TA AGCTTTA C T                                                           
     TA      AG ---- AGGG  C       G G TAACTGTGGGGTAAAGTTTTAAAGTAGCTTTCGAGATATTGGACTTAAACCTCCAGGGA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]