Atr-MIRN35d

Basic info.

• miRNA locus ID
• Atr-MIRN35d

• miRNA locus accession
• PmiREN000335

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00427  17069  17325  -

• Comments
• A member of family MIRN35

• Confidence level
• 

Secondary strurture and sequence

AATAAGAAAATTTG       A      TTT   A    --CC    AAGA     -     GG      G     T TACTATTCATTATAGCTAGTAGCTTATACATCATTGTTTTCTATATGGATTATTT
              GATAGTG TATGAA   TGA CCAC    GATG    TCTGA CGGCT  GAGTTA TAGCT A                                                       
              ||||||| ||||||   ||| ||||    ||||    ||||| |||||  |||||| ||||| |                                                        
              TTATCAC ATACTT   ACT GGTG    CTAC    AGGCT GTCGG  GTAGTA GGTGT A                                                       
       TCAGGTA       C      ---   A    TACC    ----     A     AA      C     - GGATACACCTACTACAATGTGGGTAGGATTATTGTTGTTTATGAGAATTATTTCT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]