Atr-MIRN41

Basic info.

• miRNA locus ID
• Atr-MIRN41

• miRNA locus accession
• PmiREN000339

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00008  2639527  2639794  +

• Comments
• A member of family MIRN41

• Confidence level
• 

Secondary strurture and sequence

                              ATA   C         A    ATC   ACATGAACCACAGTAGTGGCATTTAATGCTTCATGTAGATGACGTCACACTCCATGTAGATGACGTCACACTCCATGT
                    GGGGTGTGAC   ATC ACATGGGGT TGAC   ACC                                                                              
                    ||||||||||   ||| ||||||||| ||||   |||                                                                              G
                    CCCCACACTG   TAG TGTACCTCA ACTG   GTA                                                                              
CCATATAAACCAGTAATTCT          CAG   A         C    -CA   GATATACCTCGTAATTTATGGTGATCACACGAGGTACACCATTACAGTGTGGGGTACACCTACTGCACACTGTAGTCG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]