Atr-MIRN47b

Basic info.

• miRNA locus ID
• Atr-MIRN47b

• miRNA locus accession
• PmiREN000348

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00011  7850139  7850260  +

• Comments
• A member of family MIRN47

• Confidence level
• 

Secondary strurture and sequence

  AA   C     A                         C        GATCA   -C     CC
    GAC CCAAA GATCACCATTAAATTTGGCATAGAT TTTAAAAA     AGT  TCACA  
    ||| ||||| ||||||||||||||||||||||||| ||||||||     |||  |||||   
    CTG GGTTT CTAGTGGTGATTTGAACCGTGTCTA AGATTTTT     TCA  AGTGT  
TATA   A     C                         T        -----   AT     AT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]