Atr-MIRN50

Basic info.

• miRNA locus ID
• Atr-MIRN50

• miRNA locus accession
• PmiREN000350

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00009  7849245  7849378  -

• Comments
• A member of family MIRN50

• Confidence level
• 

Secondary strurture and sequence

  GCAT     TC   T TA        C       C       ---      AAGCTA    C  AT  AA
      GAAAG  TTG G  CAAATTGT GGTCGCG TACAGAT   TGAGCT      TGGG TG  GA  
      |||||  ||| |  |||||||| ||||||| |||||||   ||||||      |||| ||  ||  G
      CTTTC  AAC C  GTTTAACA CCAGTGC ATGTCTG   ACTCGA      ACCC AC  CT  
GGTTAT     CC   C GC        A       A       AGA      -----C    -  CT  CG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]