Atr-MIRN25b

Basic info.

• miRNA locus ID
• Atr-MIRN25b

• miRNA locus accession
• PmiREN000352

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00019  4429227  4429341  -

• Comments
• A member of family MIRN25

• Confidence level
• 

Secondary strurture and sequence

  TATGGATATTT       ACTA    A     C           GACTTCAATCAC
             TAGAAAA    TGAC TCATC ACATGGAATAT            
             |||||||    |||| ||||| |||||||||||            A
             ATCTTTT    ACTG AGTAG TGTACTTTGTA            
TAAAAAACAGTAA       CCAC    C     A           ATTTACGATATT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]