Atr-MIRN40b

Basic info.

• miRNA locus ID
• Atr-MIRN40b

• miRNA locus accession
• PmiREN000357

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00025  5846969  5847090  +

• Comments
• A member of family MIRN40

• Confidence level
• 

Secondary strurture and sequence

  AGGACCGCAAAT                G             A    A   ----     TA
              GATCATCATTAAATTT GCATAGATTTCTA AAAA TTA    TCGCA  
              |||||||||||||||| ||||||||||||| |||| |||    |||||   
              CTAGTGGTAATTTAAA CGTATTTAGAGAT TTTT AGT    AGTGT  
TAGATACACACATC                A             C    C   TTAG     GG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]