Atr-MIRN63

Basic info.

• miRNA locus ID
• Atr-MIRN63

• miRNA locus accession
• PmiREN000375

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00087  321863  322119  -

• Comments
• A member of family MIRN63

• Confidence level
• 

Secondary strurture and sequence

TAATCCACTC   C   TC  CA      -TT           ATTT   TTGT    AC TAAAGACCGATAAGAATCTTTTTTATATAAGAAATAATAATTTGAAACTTAAAACAGAGATTTTCAAAAGAA
          ATC ATC  TC  ATTGGA   GGAAAAGGAGA    ACA    TAAC  G                                                                        
          ||| |||  ||  ||||||   |||||||||||    |||    ||||  |                                                                        A
          TAG TAG  AG  TAATCT   TTTTTTTCTTT    CGG    ATCG  G                                                                        
       AAC   A   TA  --      TGT           ---A   ----    -- ACTCATAACCGGTCCGGCCCCTTGTTTTATTGAAAAGCCCACTTTATTCTTTTTCTTTTCCATGAGAAAGAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]