Atr-MIRN65

Basic info.

• miRNA locus ID
• Atr-MIRN65

• miRNA locus accession
• PmiREN000377

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00103  764338  764583  -

• Comments
• A member of family MIRN65

• Confidence level
• 

Secondary strurture and sequence

              C       C               C   A  G           C        T          A                    C       AAA          A     CAT
          GTTT GCATGTT ATGTAAGCATGCCAG CAT AA AAGCAATTAAT GAGCCGCA CAAACTTACA ACAAGCCAAACATGAGCCGC ATAATGC   GTATATTTCA ATTTA   
          |||| ||||||| ||||||||||||||| ||| || ||||||||||| |||||||| |||||||||| |||||||||||||||||||| |||||||   |||||||||| |||||    
          TAAA CGTACAA TACATTCGTACGGTC GTA TT TTCGTTAATTA CTCGGTGT GTTTGAATGT TGTTCGGTTTGTATTCGGCG TATTACG   CATATAAAGT TAAAT   
CCAACTAAAG    A       A               A   A  G           T        T          A                    A       CTC          G     ATG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]