Atr-MIRN66

Basic info.

• miRNA locus ID
• Atr-MIRN66

• miRNA locus accession
• PmiREN000378

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold00110  1710318  1710504  +

• Comments
• A member of family MIRN66

• Confidence level
• 

Secondary strurture and sequence

  AGCATTAGAGGAA    A     AC   G  C        A CT     ATAA   A   GTTCCAGCAAGCCGAAACATCCCATAAGAAGGAG
               GAGG CGCCA  TTC AG GGTCCAAA C  CGTGG    GGG CTG                                  
               |||| |||||  ||| || |||||||| |  |||||    ||| |||                                   
               TTCC GCGGT  AAG TC TCGGGTTT G  GCACT    TTA TTT                                  
GTTTATCTAACGGTG    C     AT   A  C        - AT     -AAC   -   AGGAGGAGATAGACAACGCCCGGCTCCCAAGGAA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]