Atr-MIRN71

Basic info.

• miRNA locus ID
• Atr-MIRN71

• miRNA locus accession
• PmiREN000384

• Organism
• Amborella trichopoda

• Genomic location
• AmTr_v1.0_scaffold02770  2690  2907  +

• Comments
• A member of family MIRN71

• Confidence level
• 

Secondary strurture and sequence

TTTTT    TG   A    ------A     CA                T -    TCTGTTGAAT    TAAGT   TCATTTGACCACATTCTGATAAGTTTTTTTATGAAAATCAAG
     TTTG  AAA TCAA       CAGTC  ATGGTTTTGACATCGG C GCAT          TTTG     GAA                                          
     ||||  ||| ||||       |||||  |||||||||||||||| | ||||          ||||     |||                                           
     GAAT  TTT AGTT       GTCAG  TACCAAGATTGTAGCC G CGTA          GTAA     ACG                                          
    T    GT   A    GTCTAAC     AC                T A    ------CTAA    -----   TGTTAAGTTGTTTACACCAGACTATAATCTTGGTAACCTGGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

Target gene info.[+]